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STRINGSTRING
PP1S15_17V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S15_17V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S15_17V6.1annotation not available (639 aa)    
Predicted Functional Partners:
PP1S60_178V6.1
Predicted protein (319 aa)
   
   
  0.778
PP1S54_102V6.1
Predicted protein (169 aa)
   
   
  0.778
PP1S209_135V6.1
Acyl-coenzyme A oxidase ; Belongs to the acyl-CoA oxidase family (667 aa)
   
 
  0.725
ppabcd5
ATP-binding cassette transporter, subfamily D, member 5, group PMP protein PpABCD5 (1383 aa)
     
 
  0.689
ppabcd6
ATP-binding cassette transporter, subfamily D, member 6, group PMP protein PpABCD6 (1342 aa)
     
 
  0.689
PP1S150_16V6.1
Predicted protein (763 aa)
     
 
  0.673
PP1S113_124V6.1
Predicted protein (665 aa)
     
 
0.653
PP1S218_19V6.1
Predicted protein (665 aa)
     
 
0.653
PP1S108_163V6.1
Predicted protein (663 aa)
     
 
0.651
PP1S47_161V6.1
Predicted protein (662 aa)
     
 
0.650
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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