STRINGSTRING
PP1S15_226V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S15_226V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S15_226V6.1Predicted protein (204 aa)    
Predicted Functional Partners:
POR1
Predicted proteinProtochlorophyllide reductase chloroplast (402 aa)
       
      0.633
POR2
Predicted protein (406 aa)
       
      0.633
PP1S84_273V6.1
Predicted protein (703 aa)
       
      0.608
PP1S34_213V6.1
Predicted protein (693 aa)
       
      0.608
PP1S367_8V6.1
Predicted protein (306 aa)
     
 
  0.562
GTC1501
FACT complex subunit (1060 aa)
           
  0.503
PP1S170_45V6.1
Predicted protein (163 aa)
           
  0.480
PP1S19_202V6.1
Predicted protein (188 aa)
           
  0.473
PP1S167_18V6.1
Predicted protein (187 aa)
           
  0.473
PP1S8328_1V6.1
Predicted protein (375 aa)
       
      0.442
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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