STRINGSTRING
PP1S15_268V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S15_268V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S15_268V6.1Predicted protein (251 aa)    
Predicted Functional Partners:
PP1S206_83V6.2
Predicted protein (365 aa)
 
  0.999
PP1S206_68V6.1
Predicted protein (186 aa)
 
  0.999
PP1S6_375V6.1
Predicted protein (657 aa)
 
 
  0.952
PP1S75_175V6.1
Predicted protein (720 aa)
   
 
  0.917
PP1S283_76V6.1
Predicted protein (726 aa)
   
 
  0.917
PP1S165_33V6.1
Predicted protein (732 aa)
   
 
  0.917
PP1S425_20V6.2
Predicted protein (524 aa)
   
 
  0.825
PP1S20_284V6.1
Predicted protein (522 aa)
   
 
  0.825
PP1S100_107V6.1
Predicted protein (518 aa)
   
 
  0.825
PP1S2633_1V6.1
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (701 aa)
     
 
  0.777
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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