STRINGSTRING
PP1S15_286V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S15_286V6.1" - Annotation not available in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S15_286V6.1Annotation not available (342 aa)    
Predicted Functional Partners:
PP1S286_33V6.1
Annotation not available (322 aa)
     
  0.991
Mcb1
Predicted protein (414 aa)
     
  0.989
PP1S68_29V6.1
Predicted protein (267 aa)
     
  0.987
PP1S48_71V6.1
Predicted protein (267 aa)
     
  0.987
PP1S46_324V6.1
Predicted protein (309 aa)
     
  0.983
PP1S146_35V6.1
Predicted protein (309 aa)
     
  0.983
PP1S3_23V6.1
Proteasome subunit beta type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (227 aa)
     
    0.982
PP1S197_115V6.1
Predicted protein (310 aa)
     
  0.982
PP1S54_11V6.1
Predicted protein (417 aa)
     
  0.981
PP1S181_105V6.1
Annotation not available (238 aa)
     
  0.981
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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