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STRINGSTRING
PP1S15_297V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S15_297V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S15_297V6.1annotation not available (658 aa)    
Predicted Functional Partners:
PP1S475_4V6.1
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (974 aa)
   
 
  0.986
PP1S14_84V6.1
Predicted protein (227 aa)
     
 
  0.986
PP1S3_646V6.1
annotation not available (1055 aa)
     
 
  0.984
PP1S31_24V6.1
annotation not available (1688 aa)
     
 
  0.982
PP1S9_477V6.1
annotation not available (1376 aa)
     
 
  0.982
PP1S90_153V6.1
Predicted protein (469 aa)
     
 
  0.981
PP1S248_24V6.1
Predicted protein (196 aa)
     
 
  0.980
PP1S391_28V6.1
annotation not available (684 aa)
     
 
  0.971
PP1S72_198V6.1
annotation not available (1160 aa)
     
 
  0.967
PP1S243_58V6.1
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily (1315 aa)
     
 
  0.962
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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