STRINGSTRING
PP1S15_397V6.3 protein (Physcomitrella patens) - STRING interaction network
"PP1S15_397V6.3" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S15_397V6.3Predicted protein (324 aa)    
Predicted Functional Partners:
PP1S55_260V6.1
Predicted protein (462 aa)
     
 
    0.806
PP1S194_151V6.1
Annotation not available (384 aa)
     
 
    0.806
PP1S14_103V6.1
Predicted protein (435 aa)
     
 
    0.806
PP1S155_33V6.1
Annotation not available (79 aa)
         
    0.800
PP1S372_60V6.1
Predicted protein (628 aa)
         
  0.521
PP1S160_136V6.1
Predicted protein (594 aa)
         
  0.521
PP1S1_415V6.1
Uncharacterized protein (373 aa)
           
  0.509
PP1S133_127V6.1
Predicted protein (364 aa)
           
  0.509
PP1S249_66V6.1
Predicted protein (152 aa)
           
  0.505
PP1S96_224V6.1
Predicted protein (578 aa)
           
  0.471
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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