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STRINGSTRING
PP1S15_397V6.3 protein (Physcomitrella patens) - STRING interaction network
"PP1S15_397V6.3" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S15_397V6.3Predicted protein (324 aa)    
Predicted Functional Partners:
PP1S249_66V6.1
Predicted protein (152 aa)
           
  0.999
PP1S263_36V6.1
Predicted protein (415 aa)
         
  0.855
PP1S55_260V6.1
Predicted protein (462 aa)
     
 
    0.807
PP1S155_32V6.1
annotation not available (411 aa)
     
 
    0.807
PP1S14_103V6.1
Predicted protein (435 aa)
     
 
    0.807
PP1S1_415V6.1
annotation not available (373 aa)
           
  0.761
PP1S133_127V6.1
Predicted protein (364 aa)
           
  0.761
PP1S72_308V6.1
Predicted protein; Belongs to the cytochrome c oxidase subunit 6A family (112 aa)
     
   
  0.691
PP1S53_180V6.3
Predicted protein; Belongs to the cytochrome c oxidase subunit 6A family (132 aa)
     
   
  0.691
PP1S59_117V6.1
Uncharacterized protein (402 aa)
     
   
  0.646
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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