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STRINGSTRING
PP1S160_150V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S160_150V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S160_150V6.1annotation not available (572 aa)    
Predicted Functional Partners:
PP1S200_113V6.1
annotation not available (419 aa)
           
  0.741
PP1S333_9V6.1
Predicted protein (128 aa)
       
      0.726
PP1S330_45V6.1
Predicted protein (128 aa)
       
      0.726
PP1S32_16V6.1
Predicted protein (128 aa)
       
      0.726
PP1S284_11V6.1
Predicted protein (128 aa)
       
      0.726
PP1S268_35V6.1
Predicted protein (128 aa)
       
      0.726
PP1S241_60V6.1
Predicted protein (128 aa)
       
      0.726
PP1S42_181V6.1
Predicted protein; Ubiquitin carboxyl-terminal hydrolase ; Belongs to the peptidase C19 family (1115 aa)
     
      0.625
PP1S15_414V6.2
Predicted protein; Ubiquitin carboxyl-terminal hydrolase (1328 aa)
     
      0.625
PP1S123_138V6.1
Predicted protein; Ubiquitin carboxyl-terminal hydrolase ; Belongs to the peptidase C19 family (1125 aa)
     
      0.625
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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