STRINGSTRING
PP1S160_78V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S160_78V6.1" - Annotation not available in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S160_78V6.1Annotation not available (2263 aa)    
Predicted Functional Partners:
PPMA10
MIKC MADS-domain protein PPMA10 (422 aa)
       
  0.895
PPM6
MIKC MADS-domain protein PPM6Ppm6 MIKC* MADS-domain protein PPM6 (410 aa)
       
  0.895
PPMA8
MIKC MADS--domain protein PPMA8 (410 aa)
       
  0.895
PPTIM3
Type I MADS-domain protein PPTIM3 (296 aa)
       
  0.895
PPTIM2
Type I-M alpha MADS-domain protein PPTIM2 (182 aa)
       
  0.895
PPM2
MIKCC MADS-domain protein PPM2 (348 aa)
       
  0.895
PPMA9
MIKC MADS-domain protein PPMA9 (411 aa)
       
  0.895
PpMADS3
MIKC MADS-domain protein PpMADS3 (416 aa)
       
  0.895
PPTIM7
Type I-M beta MADS-box MADS-domain protein, PPTIM7 (391 aa)
       
  0.895
PP1S34_376V6.1
Annotation not available (249 aa)
       
  0.895
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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