STRINGSTRING
PP1S161_12V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S161_12V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S161_12V6.1annotation not available (495 aa)    
Predicted Functional Partners:
PP1S59_305V6.1
annotation not available (823 aa)
       
 
  0.935
PP1S324_39V6.1
annotation not available (761 aa)
       
 
  0.935
PP1S62_228V6.1
annotation not available (250 aa)
       
 
  0.918
PP1S114_181V6.1
annotation not available (980 aa)
       
 
  0.918
PP1S46_194V6.2
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
       
      0.846
PP1S227_112V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (224 aa)
       
      0.846
PP1S114_33V6.3
Predicted protein (247 aa)
           
  0.628
PP1S85_35V6.1
annotation not available (353 aa)
     
   
  0.625
PP1S224_52V6.1
Predicted protein (296 aa)
     
   
  0.625
PP1S300_41V6.1
Predicted protein (670 aa)
           
  0.608
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (7%) [HD]