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PP1S161_13V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S161_13V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S161_13V6.1Predicted protein (849 aa)    
Predicted Functional Partners:
GTC1501
FACT complex subunit (1060 aa)
     
 
  0.961
PP1S9294_1V6.1
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (293 aa)
     
 
  0.930
PP1S517_8V6.1
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner (761 aa)
     
 
  0.930
PP1S33_203V6.1
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1397 aa)
     
 
  0.930
PP1S275_106V6.1
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner (785 aa)
     
 
  0.930
PP1S122_165V6.1
Predicted protein (1022 aa)
     
 
  0.930
PP1S109_208V6.1
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1464 aa)
     
 
  0.930
PP1S543_12V6.1
annotation not available (1058 aa)
     
      0.855
PP1S22_59V6.1
Predicted protein (515 aa)
     
      0.852
PP1S15_297V6.1
annotation not available (658 aa)
     
 
  0.848
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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