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PP1S161_14V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S161_14V6.1" - ATP-dependent Clp protease proteolytic subunit in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S161_14V6.1ATP-dependent Clp protease proteolytic subunit (288 aa)    
Predicted Functional Partners:
PP1S163_100V6.1
Predicted protein (695 aa)
 
 
  0.956
PP1S98_222V6.1
Predicted protein (701 aa)
 
 
  0.956
PP1S171_84V6.1
Predicted protein (723 aa)
 
 
  0.956
PP1S33_311V6.1
Predicted protein (256 aa)
   
 
  0.831
PP1S12_85V6.2
Predicted protein (249 aa)
   
 
  0.831
PP1S91_37V6.1
Predicted protein (1122 aa)
   
 
  0.829
PP1S88_195V6.1
Predicted protein (937 aa)
   
 
  0.829
PP1S81_51V6.1
Predicted protein (937 aa)
   
 
  0.829
PP1S78_141V6.1
Predicted protein (780 aa)
   
 
  0.829
PP1S62_161V6.1
Annotation not available (1004 aa)
   
 
  0.829
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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