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STRINGSTRING
PP1S163_81V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S163_81V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S163_81V6.1Predicted protein (927 aa)    
Predicted Functional Partners:
brk1
Predicted protein (79 aa)
       
 
  0.833
PP1S89_249V6.1
annotation not available (369 aa)
       
 
  0.560
PP1S360_34V6.1
annotation not available (381 aa)
       
 
  0.560
PP1S47_79V6.1
Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks (175 aa)
       
 
  0.546
PP1S141_25V6.1
Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks (175 aa)
       
 
  0.546
ARP1507
Actin related protein Arp2 subunit ; Belongs to the actin family (391 aa)
       
 
  0.532
PP1S7_387V6.1
annotation not available (1285 aa)
     
   
  0.521
PP1S441_22V6.2
annotation not available (1271 aa)
     
   
  0.521
PP1S172_23V6.1
Predicted protein (305 aa)
           
  0.511
PP1S132_186V6.1
Predicted protein (304 aa)
           
  0.511
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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