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STRINGSTRING
PP1S163_94V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S163_94V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S163_94V6.1annotation not available (507 aa)    
Predicted Functional Partners:
PP1S302_63V6.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate (684 aa)
   
  0.979
PP1S9_243V6.1
annotation not available (518 aa)
   
  0.974
PP1S49_154V6.1
Predicted protein (500 aa)
   
  0.974
PP1S7_156V6.1
Uncharacterized protein (424 aa)
   
  0.970
PP1S63_54V6.2
Predicted protein (423 aa)
   
  0.970
PP1S46_63V6.2
Predicted protein (610 aa)
   
  0.970
PP1S35_384V6.2
Predicted protein (610 aa)
   
  0.970
PP1S40_9V6.1
Malate synthase ; Belongs to the malate synthase family (559 aa)
   
 
  0.965
PP1S39_428V6.1
Malate dehydrogenase (361 aa)
   
  0.951
PP1S38_300V6.1
Malate dehydrogenase (361 aa)
   
  0.951
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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