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ppabci9 protein (Physcomitrella patens) - STRING interaction network
"ppabci9" - ATP-binding cassette transporter, subfamily I, member 9, ABC component protein PpABCI9 in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppabci9ATP-binding cassette transporter, subfamily I, member 9, ABC component protein PpABCI9 (332 aa)    
Predicted Functional Partners:
ppabci4
ATP-binding cassette transporter, subfamily I, member 4, ABC component protein PpABCI4 (294 aa)
   
0.990
PP1S55_93V6.1
annotation not available (336 aa)
           
  0.771
PP1S7_433V6.1
annotation not available (381 aa)
       
 
  0.734
PP1S7_432V6.1
Uncharacterized protein (688 aa)
       
 
  0.734
ppabci1
ATP-binding cassette transporter, subfamily I, member 1, ABC component protein PpABCI1 (291 aa)
           
  0.705
ppabci5
ATP-binding cassette transporter, subfamily I, member 5, ABC component protein PpABCI5 (228 aa)
         
  0.702
ppabci10
ATP-binding cassette transporter, subfamily I, member 10, ABC component protein PpABCI10 (555 aa)
           
  0.684
PP1S188_89V6.1
annotation not available (420 aa)
           
  0.684
PP1S246_8V6.1
Predicted protein (293 aa)
 
       
  0.684
ppabci12
ATP-binding cassette transporter, subfamily I, member 12, ABC component protein PpABCI12 (443 aa)
           
  0.659
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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