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PHY4 protein (Physcomitrella patens) - STRING interaction network
"PHY4" - Phytochrome 4 in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHY4Phytochrome 4; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1126 aa)    
Predicted Functional Partners:
PP1S69_37V6.1
Predicted protein (728 aa)
     
  0.968
PP1S68_85V6.1
Predicted protein (702 aa)
     
  0.968
PHY2
Phytochrome 2; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1130 aa)
   
 
0.935
PP1S4_496V6.1
Phytochrome-related protein (98 aa)
       
  0.895
PP1S87_156V6.1
Predicted protein (307 aa)
       
 
  0.853
PP1S80_72V6.1
Predicted protein (299 aa)
       
 
  0.853
PHY5b
Phytochrome 5b3; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1131 aa)
   
0.850
PP1S84_22V6.1
Predicted protein (729 aa)
     
 
  0.847
PP1S147_126V6.1
Predicted protein (772 aa)
     
 
  0.847
CRY1a
Cryptochrome 1a (727 aa)
     
 
  0.833
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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