STRINGSTRING
NDPK1 protein (Physcomitrella patens) - STRING interaction network
"NDPK1" - Nucleoside diphosphate kinase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NDPK1Nucleoside diphosphate kinase (152 aa)    
Predicted Functional Partners:
PP1S29_171V6.1
Predicted protein (546 aa)
   
  0.980
PP1S61_267V6.1
Predicted protein (244 aa)
   
  0.970
PP1S49_285V6.1
Predicted protein (363 aa)
   
  0.970
PP1S353_37V6.1
Predicted protein (299 aa)
   
  0.970
PP1S31_221V6.1
Predicted protein (214 aa)
   
  0.970
PP1S234_106V6.1
Predicted protein (298 aa)
   
  0.970
PP1S22_258V6.1
Predicted protein (257 aa)
   
  0.970
PP1S214_32V6.1
Predicted protein (324 aa)
   
  0.970
PP1S14_311V6.1
Predicted protein (355 aa)
   
  0.970
PP1S83_28V6.1
Predicted protein; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors (249 aa)
   
  0.969
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (16%) [HD]