STRINGSTRING
PP1S165_46V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S165_46V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S165_46V6.1annotation not available (359 aa)    
Predicted Functional Partners:
PP1S63_52V6.3
Predicted protein (497 aa)
           
  0.630
CBL02
Calcineurin B-like protein 02 (213 aa)
           
  0.546
CBL03
Calcineurin B-like protein 03 (232 aa)
           
  0.546
PP1S65_59V6.1
annotation not available (184 aa)
           
  0.524
CBL04
Calcineurin B-like protein 04 (239 aa)
           
  0.524
CBL01
Calcineurin B-like protein 01 (213 aa)
           
  0.524
PP1S229_38V6.1
Predicted protein (927 aa)
           
  0.522
PP1S62_215V6.1
annotation not available (1149 aa)
           
  0.521
SYP3A1
Qa-SNARE, SYP3/Sed5p/Syntaxin 5-type (357 aa)
           
  0.499
SYP3A2
Qa-SNARE, SYP3/Sed5p/Syntaxin 5-type ; Belongs to the syntaxin family (355 aa)
           
  0.499
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (7%) [HD]