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STRINGSTRING
PP1S166_43V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S166_43V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S166_43V6.1Predicted protein (1280 aa)    
Predicted Functional Partners:
PP1S219_74V6.1
Predicted protein (205 aa)
     
 
  0.998
PP1S218_52V6.1
Predicted protein (804 aa)
     
   
  0.997
PP1S96_202V6.1
Predicted protein (746 aa)
     
 
  0.994
PP1S4_22V6.1
Predicted protein; Belongs to the protein kinase superfamily (1103 aa)
     
 
  0.993
PP1S309_58V6.1
Predicted protein; Belongs to the protein kinase superfamily (1173 aa)
     
 
  0.993
PP1S61_325V6.1
annotation not available (376 aa)
     
 
  0.993
PP1S42_51V6.1
Predicted protein (590 aa)
     
 
  0.993
PP1S56_97V6.1
annotation not available (452 aa)
     
 
  0.992
PP1S31_151V6.1
annotation not available (753 aa)
     
 
  0.991
PP1S136_31V6.1
annotation not available (753 aa)
     
 
  0.991
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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