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STRINGSTRING
PP1S167_154V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S167_154V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S167_154V6.2Predicted protein (337 aa)    
Predicted Functional Partners:
PP1S47_221V6.1
Predicted protein (208 aa)
     
        0.867
PP1S2121_1V6.1
Predicted protein (133 aa)
     
        0.867
PP1S130_292V6.1
Predicted protein (196 aa)
     
        0.865
PP1S196_77V6.1
Trehalase (605 aa)
     
        0.858
PP1S194_104V6.3
Trehalase (580 aa)
     
        0.858
PP1S137_159V6.1
Trehalase (609 aa)
     
        0.858
PP1S116_30V6.1
Trehalase (574 aa)
     
        0.858
PP1S53_177V6.1
Predicted protein (126 aa)
     
        0.810
PP1S15_130V6.1
Predicted protein (113 aa)
     
        0.810
PP1S403_10V6.1
Predicted protein (272 aa)
     
        0.717
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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