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STRINGSTRING
PP1S168_101V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S168_101V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S168_101V6.1Predicted protein (1195 aa)    
Predicted Functional Partners:
PP1S263_30V6.1
Predicted protein (549 aa)
     
   
  0.708
PP1S156_168V6.1
annotation not available (846 aa)
     
   
  0.677
PP1S49_272V6.1
Predicted protein (625 aa)
           
  0.610
PP1S197_70V6.2
Predicted protein; Belongs to the DEAD box helicase family (482 aa)
     
 
  0.568
PP1S70_29V6.1
annotation not available (1226 aa)
     
   
  0.566
PP1S142_94V6.1
Predicted protein (1092 aa)
     
   
  0.566
PP1S2633_1V6.1
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (701 aa)
     
 
  0.556
PP1S375_28V6.1
Predicted protein (483 aa)
       
 
  0.551
PP1S55_177V6.1
Predicted protein (312 aa)
           
  0.545
PP1S87_109V6.1
Predicted protein (238 aa)
     
   
  0.532
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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