• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S168_54V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S168_54V6.1" - Xyloglucan endotransglucosylase/hydrolase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S168_54V6.1Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues; Belongs to the glycosyl hydrolase 16 family (296 aa)    
Predicted Functional Partners:
PP1S199_13V6.1
Predicted protein (1937 aa)
     
 
  0.565
PP1S406_3V6.1
Predicted protein (782 aa)
   
   
  0.541
PP1S196_21V6.2
Predicted protein (800 aa)
   
   
  0.541
PP1S49_195V6.1
Predicted protein; Belongs to the glycosyl hydrolase 3 family (613 aa)
   
   
  0.536
PP1S309_65V6.1
Predicted protein; Belongs to the glycosyl hydrolase 3 family (629 aa)
   
   
  0.536
PP1S217_8V6.1
Predicted protein; Belongs to the glycosyl hydrolase 3 family (637 aa)
   
   
  0.536
PP1S1821_1V6.1
annotation not available (676 aa)
   
   
  0.536
PP1S114_132V6.1
Predicted protein (683 aa)
           
  0.518
PP1S91_60V6.1
Predicted protein (287 aa)
           
  0.485
PP1S260_6V6.1
Predicted protein (281 aa)
           
  0.485
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (8%) [HD]