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STRINGSTRING
SGS1501 protein (Physcomitrella patens) - STRING interaction network
"SGS1501" - Suppressor of silencing in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGS1501Suppressor of silencing (725 aa)    
Predicted Functional Partners:
PP1S149_37V6.1
annotation not available (1403 aa)
           
  0.999
RDR1502
RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) (1152 aa)
     
 
  0.985
HEN1501
HEN1 protein (1021 aa)
           
  0.899
RDR1501
RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) (1151 aa)
     
 
  0.862
RHEL1501
RNA helicase (1214 aa)
     
   
  0.849
RDR1504
RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) (1017 aa)
     
 
  0.801
RDR1503
RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) (1046 aa)
     
 
  0.801
DRB1501
Double-stranded RNA binding protein (441 aa)
           
  0.791
DCL1504
annotation not available (1602 aa)
           
  0.759
PP1S82_159V6.1
annotation not available (319 aa)
           
  0.759
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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