• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S169_50V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S169_50V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S169_50V6.1Predicted protein (480 aa)    
Predicted Functional Partners:
PP1S71_174V6.2
Predicted protein (599 aa)
   
  0.999
PP1S20_351V6.1
Predicted protein (599 aa)
   
  0.999
PP1S84_125V6.1
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family (1082 aa)
   
   
  0.983
PP1S70_257V6.1
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family (995 aa)
   
   
  0.975
PP1S75_41V6.1
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family (1006 aa)
   
   
  0.957
PP1S185_119V6.1
Predicted protein (264 aa)
   
   
  0.949
PP1S303_55V6.1
Lysine--tRNA ligase (637 aa)
   
   
  0.948
PP1S84_273V6.1
Predicted protein (703 aa)
   
 
  0.936
PP1S8328_1V6.1
Predicted protein (375 aa)
   
 
  0.936
PP1S400_36V6.1
Predicted protein (685 aa)
   
 
  0.936
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (17%) [HD]