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STRINGSTRING
PP1S169_81V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S169_81V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S169_81V6.1Predicted protein (571 aa)    
Predicted Functional Partners:
PP1S42_273V6.1
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle (255 aa)
           
  0.600
PP1S395_49V6.1
annotation not available (182 aa)
       
 
  0.595
PP1S81_211V6.1
Predicted protein (473 aa)
           
  0.550
PP1S26_199V6.1
annotation not available (424 aa)
     
   
  0.544
PP1S201_10V6.1
annotation not available (417 aa)
     
   
  0.544
PP1S93_76V6.1
annotation not available (2027 aa)
       
 
  0.535
PP1S162_72V6.1
annotation not available (371 aa)
       
 
  0.535
PP1S162_71V6.1
annotation not available (1690 aa)
       
 
  0.535
PP1S478_15V6.1
Mannosyltransferase (585 aa)
           
  0.520
PP1S535_3V6.1
Methylenetetrahydrofolate reductase (592 aa)
           
  0.513
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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