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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S16_106V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S16_106V6.2" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S16_106V6.2annotation not available (193 aa)    
Predicted Functional Partners:
PP1S16_28V6.1
annotation not available (270 aa)
     
   
  0.520
PP1S69_151V6.1
annotation not available (426 aa)
   
   
  0.505
PP1S96_224V6.1
Predicted protein (578 aa)
         
  0.496
PP1S325_20V6.1
Predicted protein (578 aa)
         
  0.496
PP1S304_59V6.1
Predicted protein; Belongs to the chalcone/stilbene synthases family (418 aa)
         
  0.431
PP1S523_12V6.1
Predicted protein (629 aa)
     
   
  0.429
PP1S40_48V6.4
Predicted protein (581 aa)
     
   
  0.429
PP1S56_71V6.1
Predicted protein (378 aa)
     
   
  0.424
PP1S159_5V6.2
Predicted protein (209 aa)
     
   
  0.424
PP1S110_18V6.3
Predicted protein (212 aa)
     
   
  0.424
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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