• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S16_206V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S16_206V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S16_206V6.1annotation not available (454 aa)    
Predicted Functional Partners:
PP1S40_9V6.1
Malate synthase ; Belongs to the malate synthase family (559 aa)
     
   
  0.931
PP1S291_43V6.1
Predicted protein (408 aa)
   
 
  0.906
PP1S370_6V6.1
Predicted protein; Belongs to the calycin superfamily. Lipocalin family (341 aa)
   
   
  0.902
PP1S103_79V6.1
Predicted protein (300 aa)
     
   
  0.898
PP1S66_287V6.1
Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX; Belongs to the Mg-chelatase subunits D/I family (779 aa)
     
        0.885
PP1S523_20V6.1
Predicted protein (501 aa)
     
        0.885
PP1S46_69V6.1
Predicted protein; Belongs to the universal ribosomal protein uL11 family (221 aa)
     
        0.885
PP1S204_118V6.3
Predicted protein; Belongs to the universal ribosomal protein uL11 family (262 aa)
     
        0.885
PP1S141_43V6.1
Predicted protein; Belongs to the universal ribosomal protein uL11 family (261 aa)
     
        0.885
PP1S74_243V6.1
annotation not available (1053 aa)
     
        0.884
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (8%) [HD]