• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
NTMC2T1.1 protein (Physcomitrella patens) - STRING interaction network
"NTMC2T1.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NTMC2T1.1annotation not available (538 aa)    
Predicted Functional Partners:
PP1S20_113V6.1
annotation not available (155 aa)
           
  0.523
PP1S7_156V6.1
Uncharacterized protein (424 aa)
           
  0.508
PP1S63_54V6.2
Predicted protein (423 aa)
           
  0.508
PP1S57_170V6.1
Predicted protein (286 aa)
           
  0.504
PP1S26_166V6.1
Predicted protein; Belongs to the glycosyl hydrolase 17 family (382 aa)
           
  0.504
PP1S30_33V6.1
Uncharacterized protein (363 aa)
           
  0.503
PP1S10_400V6.1
annotation not available (1219 aa)
           
  0.485
PP1S68_127V6.1
Predicted protein (233 aa)
           
  0.412
PP1S269_15V6.1
Predicted protein (233 aa)
           
  0.412
PP1S269_14V6.2
Predicted protein (280 aa)
           
  0.412
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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