• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S16_261V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S16_261V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S16_261V6.1annotation not available (495 aa)    
Predicted Functional Partners:
PP1S1362_2V6.1
Predicted protein (305 aa)
     
 
  0.588
PP1S10_248V6.2
Predicted protein (393 aa)
           
  0.522
PP1S159_5V6.2
Predicted protein (209 aa)
           
  0.519
PP1S110_18V6.3
Predicted protein (212 aa)
           
  0.519
PP1S11890_1V6.1
Predicted protein; Alkaline phosphatase ; Belongs to the alkaline phosphatase family (223 aa)
     
   
  0.505
PP1S35_174V6.1
Predicted protein (2426 aa)
           
  0.505
PP1S370_61V6.1
Threonine dehydratase (670 aa)
           
  0.502
PP1S396_8V6.1
annotation not available (1069 aa)
     
   
  0.460
VPS33
SM/Sec1-family protein ; Belongs to the STXBP/unc-18/SEC1 family (605 aa)
     
 
  0.452
PP1S24_39V6.1
Predicted protein (434 aa)
     
   
  0.439
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (7%) [HD]