STRINGSTRING
PP1S16_395V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S16_395V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S16_395V6.1Annotation not available (276 aa)    
Predicted Functional Partners:
PP1S90_86V6.1
Predicted protein (1076 aa)
     
  0.994
PP1S222_41V6.1
Predicted protein (1022 aa)
     
  0.994
PP1S152_6V6.1
Annotation not available (1416 aa)
     
  0.994
PP1S134_115V6.1
Predicted protein (464 aa)
     
  0.994
PP1S257_1V6.1
Predicted protein (479 aa)
     
  0.994
PP1S222_133V6.1
Annotation not available (863 aa)
     
  0.994
PP1S192_40V6.1
Annotation not available (885 aa)
     
  0.994
PP1S474_7V6.1
Predicted protein (918 aa)
   
  0.990
PP1S58_199V6.1
Predicted protein (723 aa)
   
  0.990
PP1S46_194V6.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
     
  0.986
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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