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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S16_83V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S16_83V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S16_83V6.1annotation not available (495 aa)    
Predicted Functional Partners:
PP1S100_92V6.1
annotation not available (1946 aa)
       
 
  0.979
PP1S179_1V6.1
Predicted protein (342 aa)
     
 
  0.957
PP1S62_17V6.1
annotation not available (797 aa)
     
 
  0.944
PP1S41_79V6.1
annotation not available (1962 aa)
     
   
  0.704
PP1S279_18V6.1
annotation not available (1495 aa)
     
   
  0.704
PP1S249_97V6.1
Predicted protein; Belongs to the MT-A70-like family (810 aa)
     
   
  0.634
PP1S121_170V6.1
annotation not available (663 aa)
     
   
  0.633
PP1S20_328V6.1
annotation not available (867 aa)
           
  0.605
PP1S80_87V6.1
annotation not available (1915 aa)
       
 
  0.580
PP1S9_212V6.3
annotation not available (294 aa)
     
   
  0.556
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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