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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S172_10V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S172_10V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S172_10V6.1Predicted protein (102 aa)    
Predicted Functional Partners:
PP1S68_186V6.1
Predicted protein; Belongs to the SKP1 family (101 aa)
     
 
  0.953
PP1S424_27V6.1
Predicted protein; Belongs to the SKP1 family (265 aa)
     
 
  0.953
PP1S9_378V6.1
annotation not available (128 aa)
     
   
  0.938
PP1S152_109V6.1
Predicted protein (543 aa)
           
  0.885
PP1S373_15V6.1
annotation not available (37 aa)
     
        0.862
PP1S70_78V6.1
annotation not available (163 aa)
       
      0.817
PP1S3_241V6.1
Predicted protein (403 aa)
       
      0.817
PP1S353_39V6.1
annotation not available (403 aa)
       
      0.817
PP1S234_105V6.1
annotation not available (95 aa)
       
      0.817
BRD1503
annotation not available (716 aa)
       
      0.817
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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