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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S1736_1V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S1736_1V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S1736_1V6.1annotation not available (787 aa)    
Predicted Functional Partners:
PP1S88_186V6.1
Predicted protein (1189 aa)
     
 
  0.932
PP1S81_123V6.1
Predicted protein (1194 aa)
     
 
  0.932
PP1S84_219V6.2
Predicted protein (484 aa)
     
   
  0.898
PP1S59_135V6.1
Uncharacterized protein (824 aa)
     
   
  0.898
PP1S33_84V6.1
Predicted protein; Belongs to the CTL (choline transporter-like) family (1098 aa)
     
   
  0.760
PP1S191_108V6.1
Predicted protein; Belongs to the CTL (choline transporter-like) family (1006 aa)
     
   
  0.760
PP1S1362_2V6.1
Predicted protein (305 aa)
   
 
 
  0.725
PP1S31_164V6.1
Cysteine protease (386 aa)
     
   
  0.663
PP1S130_263V6.1
Cysteine protease (386 aa)
     
   
  0.663
PP1S24_39V6.1
Predicted protein (434 aa)
     
 
  0.624
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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