STRINGSTRING
PP1S173_112V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S173_112V6.1" - Uncharacterized protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S173_112V6.1Uncharacterized protein (340 aa)    
Predicted Functional Partners:
RabE13
Rab8/RabE-family small GTPase (216 aa)
       
      0.884
RabE12
Rab8/RabE-family small GTPase (216 aa)
       
      0.884
RabE11
Rab8/RabE-family small GTPase (216 aa)
       
      0.884
RabE15
Rab8/RabE-family small GTPase (215 aa)
       
      0.884
RabE14
Rab8/RabE-family small GTPase (215 aa)
       
      0.884
PP1S64_187V6.1
Predicted protein (522 aa)
       
      0.882
PP1S15_383V6.1
Annotation not available (483 aa)
       
      0.882
PP1S14_250V6.2
Predicted protein (522 aa)
       
      0.882
PP1S43_137V6.1
Predicted protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (900 aa)
     
  0.716
PP1S338_11V6.1
Predicted protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (899 aa)
     
  0.716
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (5%) [HD]