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STRINGSTRING
PP1S173_63V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S173_63V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S173_63V6.1annotation not available (596 aa)    
Predicted Functional Partners:
PP1S263_19V6.1
Predicted protein (641 aa)
     
        0.783
PP1S59_320V6.1
Uncharacterized protein; Belongs to the RNase T2 family (318 aa)
           
  0.740
PP1S358_60V6.1
Predicted protein; Belongs to the RNase T2 family (342 aa)
           
  0.740
PP1S2_341V6.1
Predicted protein (466 aa)
     
   
  0.725
PP1S50_92V6.1
Predicted protein (564 aa)
   
   
  0.684
PP1S322_36V6.1
Predicted protein (191 aa)
   
   
  0.683
PP1S68_124V6.1
Predicted protein; Mitochondrial GTPase 1 (338 aa)
   
   
  0.680
PP1S22_254V6.1
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (844 aa)
   
 
  0.677
PP1S100_74V6.1
Predicted protein (225 aa)
   
 
  0.677
PP1S86_217V6.1
Predicted protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (504 aa)
   
   
  0.652
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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