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PP1S173_64V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S173_64V6.1" - tRNA in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
PP1S173_64V6.1tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the class I-like SAM-binding methyltransferase superfamily. TRM5/TYW2 family (485 aa)    
Predicted Functional Partners:
PP1S302_56V6.1
annotation not available (1177 aa)
   
   
  0.989
PP1S17_13V6.1
tRNA (adenine(58)-N(1))-methyltransferase (339 aa)
   
 
  0.988
PP1S114_86V6.1
Predicted protein (741 aa)
   
 
  0.941
PP1S31_215V6.1
Predicted protein (502 aa)
     
        0.885
PP1S29_180V6.1
annotation not available (603 aa)
     
        0.879
PP1S294_14V6.1
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (434 aa)
     
        0.867
PP1S15_233V6.1
tRNA (guanine(26)-N(2))-dimethyltransferase (715 aa)
     
   
  0.856
PP1S58_120V6.1
Predicted protein (122 aa)
     
 
  0.846
PP1S83_180V6.1
annotation not available (842 aa)
     
   
  0.806
PP1S16_271V6.1
annotation not available (245 aa)
   
   
  0.785
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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