• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
SDG1505 protein (Physcomitrella patens) - STRING interaction network
"SDG1505" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG1505annotation not available (1101 aa)    
Predicted Functional Partners:
SDG1530
Histone-lysine N-methyltransferase (614 aa)
     
 
0.909
PP1S220_98V6.1
annotation not available (599 aa)
       
 
  0.867
PP1S42_67V6.1
annotation not available (2040 aa)
     
 
  0.805
PP1S138_176V6.1
Predicted protein (2032 aa)
     
 
  0.805
PP1S17_341V6.1
annotation not available (948 aa)
     
 
  0.804
PGE1501
Transcriptional repressor EED/ESC/FIE (376 aa)
     
 
  0.793
PP1S76_183V6.1
annotation not available (555 aa)
     
 
  0.695
PP1S213_95V6.1
annotation not available (308 aa)
     
 
  0.678
PP1S274_85V6.1
Predicted protein (1062 aa)
     
      0.620
PP1S257_37V6.1
DNA polymerase (1555 aa)
     
      0.613
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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