• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
GAL2 protein (Physcomitrella patens) - STRING interaction network
"GAL2" - AtGAI1 GRAS E3 ubiquitin ligase protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL2AtGAI1 GRAS E3 ubiquitin ligase protein (595 aa)    
Predicted Functional Partners:
GLP1
GLP1 GID1-like protein (336 aa)
       
  0.903
PP1S69_37V6.1
Predicted protein (728 aa)
       
  0.884
PP1S68_85V6.2
Predicted protein (702 aa)
       
  0.884
GAL1
GAI1-like E3 ubiquitin ligase protein (712 aa)
         
0.803
PpGA2ox3
GA 2-oxidase ; Belongs to the iron/ascorbate-dependent oxidoreductase family (378 aa)
           
  0.766
PpGA3ox4
GA 3-oxidase ; Belongs to the iron/ascorbate-dependent oxidoreductase family (348 aa)
           
  0.681
PP1S456_4V6.1
Predicted protein (961 aa)
           
  0.647
PP1S346_18V6.1
annotation not available (621 aa)
           
  0.647
PHY5b
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1131 aa)
       
 
  0.635
PHY5a
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1155 aa)
       
 
  0.635
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (7%) [HD]