• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S175_97V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S175_97V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S175_97V6.1annotation not available (128 aa)    
Predicted Functional Partners:
PP1S311_79V6.2
Predicted protein (476 aa)
     
   
  0.613
PP1S22_422V6.1
annotation not available (464 aa)
     
 
  0.604
PP1S11_360V6.1
Predicted protein (420 aa)
     
 
  0.604
PP1S222_40V6.1
Predicted protein; Belongs to the sterol desaturase family (256 aa)
     
 
  0.587
PP1S190_71V6.1
CDP-diacylglycerol--inositol 3-phosphatidyltransferase (234 aa)
     
   
  0.584
PP1S4_386V6.1
annotation not available (505 aa)
     
 
  0.584
PP1S129_113V6.1
annotation not available (502 aa)
     
 
  0.584
PP1S118_230V6.1
annotation not available (495 aa)
     
 
  0.584
PP1S49_167V6.1
Predicted protein (372 aa)
           
  0.578
PP1S70_225V6.3
Predicted protein (265 aa)
       
 
  0.573
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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