STRINGSTRING
PP1S176_113V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S176_113V6.2" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S176_113V6.2Annotation not available (366 aa)    
Predicted Functional Partners:
PP1S33_43V6.1
Protection of telomeres 1 protein (545 aa)
       
 
  0.804
GTF1502.1
TATA-box binding protein, component of TFIID and TFIIIB (211 aa)
       
      0.633
GTF1502.2
TATA-box binding protein, component of TFIID and TFIIIB (265 aa)
       
      0.633
PP1S60_106V6.2
Predicted protein (465 aa)
           
  0.537
papr
Predicted protein (359 aa)
           
  0.469
PP1S160_61V6.1
Predicted protein (700 aa)
           
  0.446
PP1S114_137V6.1
Predicted protein (699 aa)
           
  0.437
PP1S462_9V6.1
Annotation not available (1620 aa)
           
  0.420
PP1S45_269V6.3
Predicted protein (225 aa)
           
  0.407
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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