• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S177_132V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S177_132V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S177_132V6.1Predicted protein (996 aa)    
Predicted Functional Partners:
PP1S72_282V6.1
Predicted protein (1081 aa)
     
        0.885
PP1S83_189V6.1
Predicted protein (460 aa)
     
        0.860
PP1S358_20V6.1
Predicted protein (491 aa)
       
      0.835
PP1S263_4V6.1
Predicted protein (1036 aa)
   
   
 
0.801
PP1S65_237V6.1
annotation not available (3914 aa)
     
        0.787
PP1S203_89V6.1
annotation not available (157 aa)
     
        0.713
PP1S203_88V6.1
annotation not available (222 aa)
     
        0.713
PP1S104_112V6.1
annotation not available (948 aa)
     
        0.713
SNAP30
Qb+Qc-SNARE, SNAP33-family (271 aa)
       
 
  0.654
SNAP29
Qb+Qc-SNARE, SNAP33-family (269 aa)
       
 
  0.654
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (7%) [HD]