• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S178_54V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S178_54V6.1" - Amine oxidase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S178_54V6.1Amine oxidase (763 aa)    
Predicted Functional Partners:
PP1S24_237V6.2
Predicted protein (485 aa)
         
  0.927
PP1S121_161V6.1
Predicted protein (482 aa)
         
  0.803
PP1S145_173V6.1
Predicted protein (388 aa)
     
 
    0.801
PP1S175_129V6.1
Predicted protein (423 aa)
         
    0.800
PP1S102_63V6.1
Predicted protein (503 aa)
         
  0.719
PP1S102_59V6.1
Predicted protein (500 aa)
         
  0.719
PP1S102_49V6.1
Predicted protein (500 aa)
         
  0.719
ALDH2A
Uncharacterized protein; Belongs to the aldehyde dehydrogenase family (553 aa)
     
  0.714
ALDH2B
Uncharacterized protein; Belongs to the aldehyde dehydrogenase family (535 aa)
     
  0.714
PP1S218_26V6.1
Predicted protein (150 aa)
     
  0.714
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (6%) [HD]