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STRINGSTRING
PP1S178_69V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S178_69V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S178_69V6.1annotation not available (275 aa)    
Predicted Functional Partners:
PP1S39_424V6.1
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (318 aa)
       
      0.810
PP1S38_196V6.1
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (319 aa)
       
      0.810
PP1S316_6V6.1
Predicted protein; Belongs to the universal ribosomal protein uS11 family (151 aa)
       
      0.810
PP1S271_98V6.1
Predicted protein; Belongs to the universal ribosomal protein uS11 family (151 aa)
       
      0.810
PP1S79_253V6.3
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family (63 aa)
       
      0.737
PP1S58_102V6.1
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family (63 aa)
       
      0.737
PP1S375_10V6.2
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family (126 aa)
       
      0.737
PP1S28_307V6.1
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family (63 aa)
       
      0.737
PP1S270_77V6.1
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family (126 aa)
       
      0.737
PP1S169_19V6.1
Predicted protein (119 aa)
       
      0.737
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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