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STRINGSTRING
PP1S178_89V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S178_89V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S178_89V6.1Predicted protein (386 aa)    
Predicted Functional Partners:
PP1S1735_2V6.1
Predicted protein (370 aa)
         
  0.593
PP1S446_8V6.1
annotation not available (373 aa)
         
  0.585
PP1S65_277V6.1
Predicted protein; Galactose-1-phosphate uridylyltransferase (345 aa)
     
   
  0.551
PP1S243_12V6.1
Predicted protein; Galactose-1-phosphate uridylyltransferase (334 aa)
     
   
  0.551
PP1S178_83V6.1
Predicted protein (318 aa)
         
  0.540
PP1S281_35V6.1
Predicted protein (258 aa)
   
   
  0.489
PP1S44_264V6.1
annotation not available (139 aa)
         
  0.483
PP1S14_204V6.1
Predicted protein (456 aa)
   
   
  0.480
PP1S152_87V6.2
Predicted protein (617 aa)
   
   
  0.458
PP1S211_20V6.1
Phosphoacetylglucosamine mutase; Interconverts GlcNAc-6-P and GlcNAc-1-P; Belongs to the phosphohexose mutase family (579 aa)
   
   
  0.456
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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