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PP1S179_15V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S179_15V6.1" - 40S ribosomal protein S3a in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S179_15V6.140S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family (264 aa)    
Predicted Functional Partners:
PP1S10_369V6.1
Predicted protein (404 aa)
   
 
  0.992
PP1S18_113V6.1
Predicted protein (403 aa)
   
 
  0.991
PP1S40_305V6.2
Predicted protein (404 aa)
   
 
  0.991
PP1S10_102V6.1
Predicted protein (403 aa)
   
 
  0.991
PP1S316_6V6.1
Predicted protein; Belongs to the universal ribosomal protein uS11 family (151 aa)
     
 
  0.990
PP1S271_98V6.1
Predicted protein; Belongs to the universal ribosomal protein uS11 family (151 aa)
     
 
  0.990
PP1S97_272V6.1
Predicted protein; Belongs to the universal ribosomal protein uS15 family (151 aa)
   
 
  0.989
PP1S45_268V6.1
Predicted protein; Belongs to the universal ribosomal protein uS15 family (75 aa)
   
 
  0.989
PP1S39_130V6.1
Predicted protein (151 aa)
   
 
  0.989
PP1S15_29V6.1
Predicted protein; Belongs to the universal ribosomal protein uS15 family (151 aa)
   
 
  0.989
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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