STRINGSTRING
PP1S17_11V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S17_11V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S17_11V6.1Annotation not available (447 aa)    
Predicted Functional Partners:
PP1S59_348V6.1
Annotation not available (1048 aa)
       
 
  0.930
PP1S172_9V6.1
Annotation not available (1303 aa)
       
 
  0.454
PP1S86_160V6.1
Predicted protein (157 aa)
           
  0.407
PP1S79_48V6.1
Annotation not available (440 aa)
           
  0.407
NBP35
Predicted protein; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. Functions as Fe-S scaffold, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins. Essential for embryo development (360 aa)
           
  0.407
PP1S240_31V6.1
Predicted protein (193 aa)
           
  0.407
PP1S199_89V6.1
Annotation not available (1133 aa)
           
  0.407
PP1S101_153V6.1
Predicted protein (373 aa)
           
  0.407
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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