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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S17_301V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S17_301V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S17_301V6.1annotation not available (1249 aa)    
Predicted Functional Partners:
PP1S462_10V6.1
annotation not available (1191 aa)
     
 
  0.909
PP1S30_74V6.1
Uncharacterized protein (275 aa)
       
 
  0.590
PP1S105_9V6.1
Predicted protein (197 aa)
       
 
  0.590
PP1S105_12V6.1
Predicted protein (197 aa)
       
 
  0.590
PP1S54_141V6.1
Predicted protein (1575 aa)
     
 
  0.553
PP1S197_39V6.1
Predicted protein (1545 aa)
     
 
  0.553
PP1S294_68V6.1
Predicted protein (184 aa)
       
 
  0.536
PP1S362_33V6.1
Predicted protein (684 aa)
           
  0.507
GH3-1
Predicted protein (636 aa)
           
  0.507
PP1S30_56V6.1
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long- chain fatty acids elongation cycle. This endoplasmic reticulum- bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursor [...] (220 aa)
           
  0.465
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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