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STRINGSTRING
PP1S17_312V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S17_312V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S17_312V6.1Predicted protein (996 aa)    
Predicted Functional Partners:
PP1S69_47V6.1
Predicted protein (322 aa)
         
  0.999
PP1S1_401V6.1
Uncharacterized protein; Belongs to the Nudix hydrolase family (388 aa)
     
 
  0.970
PP1S68_87V6.1
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family (818 aa)
   
 
  0.966
PP1S5_53V6.1
Nicotinamide-nucleotide adenylyltransferase (479 aa)
   
 
  0.958
PP1S523_22V6.1
Nicotinamide-nucleotide adenylyltransferase (489 aa)
   
 
  0.958
PP1S330_22V6.1
Nicotinamide-nucleotide adenylyltransferase (606 aa)
   
 
  0.958
PP1S77_287V6.1
annotation not available (589 aa)
     
 
0.833
PP1S387_50V6.1
Predicted protein (580 aa)
   
   
  0.681
PP1S223_42V6.1
Predicted protein (259 aa)
         
  0.621
PP1S61_115V6.1
Predicted protein (386 aa)
         
  0.620
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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