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PP1S17_378V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S17_378V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S17_378V6.1Predicted protein (421 aa)    
Predicted Functional Partners:
PP1S144_86V6.1
Predicted protein (473 aa)
   
   
  0.735
PP1S387_50V6.1
Predicted protein (580 aa)
     
 
  0.601
PP1S32_278V6.1
Predicted protein (482 aa)
   
   
  0.591
PP1S210_40V6.1
Predicted protein (475 aa)
   
   
  0.591
PP1S212_59V6.2
Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA); Belongs to the NadC/ModD family (411 aa)
   
   
  0.568
PP1S312_21V6.1
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (251 aa)
     
   
  0.563
PP1S22_40V6.1
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family (757 aa)
         
  0.558
PP1S28_399V6.1
Uncharacterized protein (320 aa)
   
   
  0.558
PP1S177_33V6.1
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids (426 aa)
     
   
  0.554
PP1S169_109V6.1
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids (423 aa)
     
   
  0.554
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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