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STRINGSTRING
PP1S180_15V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S180_15V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S180_15V6.1Predicted protein (473 aa)    
Predicted Functional Partners:
PP1S237_5V6.1
annotation not available (1076 aa)
     
   
  0.746
PP1S21_327V6.2
annotation not available (1072 aa)
     
   
  0.746
PP1S84_187V6.1
Predicted protein; Belongs to the pirin family (352 aa)
     
      0.602
PP1S17_10V6.2
Predicted protein (272 aa)
     
   
  0.601
PP1S142_120V6.1
Predicted protein (482 aa)
   
   
  0.601
PP1S13_192V6.2
Predicted protein (481 aa)
   
   
  0.601
PP1S33_221V6.1
Predicted protein (680 aa)
   
   
  0.590
PP1S172_24V6.1
Predicted protein (686 aa)
   
   
  0.590
PP1S12_189V6.2
Predicted protein (333 aa)
   
 
  0.581
PP1S211_20V6.1
Phosphoacetylglucosamine mutase; Interconverts GlcNAc-6-P and GlcNAc-1-P; Belongs to the phosphohexose mutase family (579 aa)
   
   
  0.571
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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