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STRINGSTRING
PP1S180_66V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S180_66V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S180_66V6.1annotation not available (582 aa)    
Predicted Functional Partners:
PP1S458_4V6.1
Predicted protein (1095 aa)
       
 
  0.918
PP1S203_55V6.1
Predicted protein (1089 aa)
       
 
  0.918
PP1S54_148V6.1
Predicted protein (576 aa)
       
 
  0.872
PP1S399_23V6.1
Predicted protein (349 aa)
       
 
  0.589
PP1S25_30V6.1
Predicted protein (339 aa)
       
 
  0.589
PP1S245_92V6.1
Predicted protein (343 aa)
       
 
  0.589
PP1S41_17V6.1
Predicted protein (460 aa)
           
  0.441
PP1S106_71V6.1
Origin of replication complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication (428 aa)
     
   
  0.439
PP1S95_53V6.1
annotation not available (88 aa)
     
 
  0.431
PP1S70_181V6.1
Predicted protein; Belongs to the cullin family (820 aa)
     
 
  0.431
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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